Establishment of visual LAMP method for detecting Mannheimia haemolytica in cattle
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1.College of Veterinary Medicine,Huazhong Agricultural University/ State Key Laboratory of Agricultural Microbiology, Wuhan 430070, China;2.Hubei International Scientific and Technological Cooperation Base of Veterinary Epidemiology (Huazhong Agricultural University), Wuhan 430070, China;3.Hubei Hongshan Laboratory, Wuhan 430070, China

Clc Number:

S852.61

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    Abstract:

    In order to establish a quick and efficient visual LAMP (loop-mediated isothermal amplification) molecular method for detecting Mannheimia haemolytica in cattle, specific software tool was used to design LAMP primers including inner primers, external primers and loop primers targeting M. haemolytica conservative gene lktC. The reaction temperature, Mg2+ concentration, dNTPs concentration and other conditions were optimized. Both bacteria and recombinant plasmids were used to evaluate sensitivity, and 15 related pathogens were used to evaluate specificity. The applicability was evaluated using mice lung tissue samples with clear background. The results showed that the developed LAMP assay achieved the best results under the conditions of 68.2 ℃, 6 mmol/L Mg2+, 1.6 mmol/L dNTPs for 40 min and could be judged by naked eyes. The minimum detection limits were 6.7×10-1 CFU/μL for bacteria and 7.9×102 copies/μL for lktC recombinant plasmid, and there was no cross reaction with 15 other pathogens, indicating high sensitivity and specify. The results of lung tissue samples from mice with clear background showed that the method was better than ordinary PCR method. The above results indicate that this method was successfully constructed and could be used for rapid and efficient detection of M. haemolytica in cattle.

    Fig.1 Temperature (A) , Mg2+ concentration(B), dNTPs concentration(C) and loop primers concentration(D) optimization of visual LAMP
    Fig.2 Specificity of visual LAMP
    Fig.3 Sensitivity of visual LAMP to detect bacterium
    Fig.4 Sensitivity of visual LAMP to detect lktC plasmid
    Fig.5 Sensitivity of PCR to detect A6-ZMD bacterium
    Fig.6 Sensitivity of PCR to detect lktC
    Fig.7 Comparison of visual LAMP and PCR to detect negative mice tissues
    Fig.8 Comparison of visual LAMP and PCR to detect positive mice tissues
    Table 1 Primers used in this study
    Reference
    [1] 谢倩茹,姜鹏,彭清洁,等.牛溶血性曼氏杆菌和多杀性巴氏杆菌A型、B型的比较鉴定研究[J].中国奶牛,2015(14):48-54.XIE Q R,JIANG P,PENG Q J,et al.Study on comparative identification for cattle Mannheimia haemolytica,Pasteurella multocida type A and B strains[J].China dairy cattle,2015(14):48-54 (in Chinese with English abstract).
    [2] NOYES N R,BENEDICT K M,GOW S P,et al.Mannheimia haemolytica in feedlot cattle:prevalence of recovery and associations with antimicrobial use,resistance,and health outcomes[J].Journal of veterinary internal medicine,2015,29(2):705-713.
    [3] 刘心,彭清洁,彭永崇,等.牛溶血曼氏杆菌的分离鉴定及药敏试验[J].中国兽医学报,2020,40(6):1131-1135.LIU X,PENG Q J,PENG Y C,et al.Isolation,identification and drug sensitivity test of Mannheimia haemolytica in cattle[J].Chinese journal of veterinary science,2020,40(6):1131-1135 (in Chinese with English abstract).
    [4] KLIMA C L,ZAHEER R,BRIGGS R E,et al.A multiplex PCR assay for molecular capsular serotyping of Mannheimia haemolytica serotypes 1,2,and 6[J].Journal of microbiological methods,2017,139:155-160.
    [5] 刘晓丹.六种牛源致病性细菌多重PCR检测方法的建立[D].哈尔滨:东北农业大学,2013.LIU X D.Development of multiplex PCR for detection of pathogenic bacteria[D].Harbin:Northeast Agricultural University,2013 (in Chinese with English abstract).
    [6] 李富祥,李华春,洪琼花,等.溶血性曼氏杆菌TaqMan荧光定量PCR检测方法的建立及应用[J].中国兽医科学,2016,46(10):1213-1218.LI F X,LI H C,HONG Q H,et al.Development and application of TaqMan real-time PCR assay for the detection of Mannheimia haemolytica[J].Chinese veterinary science,2016,46(10):1213-1218 (in Chinese with English abstract).
    [7] 许淑玉.牛支原体、多杀性巴氏杆菌、溶血曼氏杆菌多重PCR-ELISA检测方法的建立及初步应用[D].长春:吉林农业大学,2018.XU S Y.Development and primary application of a multiplex PCR-ELISA for the identification of Mycoplasma bovis,Pasteurella mutocida and Mannheimia haemolytica[D].Changchun:Jilin Agricultural University,2018 (in Chinese with English abstract).
    [8] 谢佳芮,寇美玲,苗海生.环介导等温扩增技术的最新研究进展[J].畜牧与兽医,2021,53(2):119-125.XIE J R,KOU M L,MIAO H S.Latest progress in research on loop-mediated isothermal amplification[J].Animal husbandry & veterinary medicine,2021,53(2):119-125(in Chinese with English abstract).
    [9] 李占鸿,朱沛,宋子昂,等.蓝舌病病毒群特异性RT-LAMP检测方法的建立与初步应用[J].畜牧兽医学报,2021,52(8):2244-2253.LI Z H,ZHU P,SONG Z A,et al.Establishment and application of a group specific reverse transcriptase loop-mediated isothermal amplification method of bluetongue virus[J].Acta veterinaria et zootechnica sinica,2021,52(8):2244-2253(in Chinese with English abstract).
    [10] 白榕,白琳琳,汪少芸,等.LAMP扩增产物检测方法研究进展及基因编辑技术在其中的应用[J].农业生物技术学报,2021,29(10):2016-2030.BAI R,BAI L L,WANG S Y,et al.Research progress of LAMP amplicons detection method and the application of gene editing technology[J].Journal of agricultural biotechnology,2021,29(10):2016-2030(in Chinese with English abstract).
    [11] SINGH R,SINGH D P,SAVARGAONKAR D,et al.Evaluation of SYBR green I based visual loop-mediated isothermal amplification (LAMP) assay for genus and species-specific diagnosis of malaria in P.vivax and P.falciparum endemic regions[J].Journal of vector borne diseases,2017,54(1):54-60.
    [12] ZHANG Y Q,SHAN X X,SHI L,et al.Development of a fimY-based loop-mediated isothermal amplification assay for detection of Salmonella in food[J].Food research international,2012,45(2):1011-1015.
    [13] 李军,吴翠兰,彭昊,等.一种快速检测溶血性曼氏杆菌的LAMP引物组及其应用:CN108660192A[P].2018-10-16.LI J,WU C L,PENG H,et al.LAMP (loop-mediated isothermal amplification) primer group for quickly detecting mannheimia haemolytica and application thereof:CN108660192A[P].2018-10-16(in Chinese).
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刘宁宁,易萍,郭爱珍,胡长敏,陈颖钰. Establishment of visual LAMP method for detecting Mannheimia haemolytica in cattle[J]. Jorunal of Huazhong Agricultural University,2023,42(2):32-37.

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  • Received:October 11,2022
  • Online: March 31,2023
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