沙门菌噬菌体T139基因组分析及其裂解酶LysT40的异源表达和活性鉴定
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“十三五”国家重点研发计划重点专项(2017YFC1600100);国家自然科学基金面上项目(31772054)


Genome analysis of Salmonella phage T139 and heterologous expression,activity characterization of its endolysin LysT40
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    摘要:

    为开发噬菌体裂解酶作为一种新型的抗菌剂,用于沙门菌的防控,采用生物信息学及异源表达蛋白的方法,获得鼠伤寒沙门菌噬菌体T139的裂解酶,并验证裂解酶对鼠伤寒沙门菌的裂解活性。通过对鼠伤寒沙门菌噬菌体T139基因组进行分析,发现该基因组全长38 854 bp,平均GC含量为49.10%,不包含tRNA基因。进化树分析表明噬菌体T139属于T7噬菌体属,共预测出43个ORFs,有23个被赋予已知功能。多序列比对及保守结构域分析表明,orf 40基因编码的蛋白(LysT40)包含126个氨基酸残基,具有内肽酶保守结构域,为可能的噬菌体裂解酶。LysT40二级结构中存在大量的螺旋结构(70.63%),使得该蛋白能够保持结构稳定。将orf 40进行异源表达、纯化,经过SDS-PAGE和Western blot分析,在10~15 ku处获得单一目标蛋白条带,纯化的蛋白质量浓度为280 μg/mL。LysT40在30 min内对氯仿或EDTA预处理的鼠伤寒沙门菌具有较好的裂解活性,吸光值OD600相比于对照组分别下降0.18和0.31。

    Abstract:

    In order to develop phage endolysin as a novel antibacterial agent for the prevention and control of Salmonella,the endolysin of Salmonella Typhimurium phage T139 was obtained by bioinformatics and heterologous expression of protein. The lytic activity of endolysin against Salmonella Typhimurium was verified. The genome of Salmonella Typhimurium phage T139 was analyzed and found to be 38 854 bp long,with an average GC content of 49.10% and no tRNA gene. The results of evolutionary tree analysis showed that phage T139 is belonged to the genus T7 phage with 43 ORFs predicted in total,23 ORFs being assigned known functions. The results of multiple sequence alignment and conserved structural domain analysis showed that the protein encoded by the orf 40 gene (LysT40) containing 126 amino acid residues with a conserved structural domain of phage endopeptidase,making it a possible phage endolysin. The presence of a large number of helical structures (70.63%) in the secondary structure of LysT40 allows the protein to maintain the stable structure. The endopeptidase gene orf 40 was heterologously expressed,purified and analyzed by SDS-PAGE and Western blot to obtain a single target protein band at 10-15 ku at a purified protein concentration of 280 μg/mL. LysT40 had significantly lytic activity against chloroform or EDTA pretreated Salmonella Typhimurium within 30 min,with absorbance values OD600 decreasing by 0.18 and 0.31 compared to the control. It will provide a basis for developing phage endolysin as antimicrobial agents to control SalmonellaTyphimurium.

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丁一峰,聂若男,朱文娟,王吉,王佳,王小红.沙门菌噬菌体T139基因组分析及其裂解酶LysT40的异源表达和活性鉴定[J].华中农业大学学报,2021,40(6):176-185

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  • 收稿日期:2021-07-15
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  • 在线发布日期: 2021-11-30
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