鲤科鱼类RNase1基因的进化与组织表达模式
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广西水产遗传育种与健康养殖重点实验室开放基金(20-238-07);国家大宗淡水鱼类产业技术体系建设项目(CARS-45-08)


Evolution and expression patterns of RNase 1 genes in several cyprinid fish species
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    摘要:

    为探究RNase 1在鱼类食性适应性进化中的作用,对不同食性的9种鲤科鱼类,包括草食性的草鱼(Ctenopharyngodon idella)和团头鲂(Megalobrama amblycephala)、杂食性的鲢(Hypophthalmichthys molitrix)、鳙(Hypophthalmichthys nobilis)、鲤(Cyprinus carpio)、黄尾鲴(Xenocypris davidi)和斑马鱼(Danio rerio)以及肉食性的翘嘴鲌(Culter alburnus)和鳡(Elopichthys bambusa)的RNase 1基因进行鉴定、序列特征分析、进化规律及组织表达模式分析。研究结果显示,与哺乳动物不同,9种鲤科鱼类基因组中只存在1个RNase 1基因,序列同源性高,且具有RNase A超家族的序列特征,包括N端信号肽序列,6个间隔的半胱氨酸残基,3个催化碱基形成的催化三联体和“CKXXNTF”序列;系统发育树显示,硬骨鱼和哺乳动物的RNase 1聚为不同分支,鲤科鱼类单独聚为一支;qRT-PCR结果显示,植食性的团头鲂和草鱼、杂食性的鳙和肉食性的翘嘴鲌的RNase 1基因在不同组织中的表达模式各不相同,4种鱼类在肝脏中相对表达量高,在团头鲂和翘嘴鲌的脾脏中表达量也高。以上结果表明,鲤科鱼类的RNase 1的进化与物种食性的关联性不大,但符合物种进化的规律。

    Abstract:

    Pancreatic ribonuclease (RNase 1) is an important digestive enzyme that has been used to study the adaptative evolution of some herbivores to herbivorous diet. Although there have been many functional studies of RNase 1 in mammals,there is little research in fish. In this study,we identified and analyzed the RNase 1 genes from 9 cyprinid fish including herbivorous Ctenopharyngodon idella and Megalobrama amblycephala,omnivorous Hypophthalmichthys molitrix,Hypophthalmichthys nobilis,Cyprinus carpio,Xenocypris davidi and Danio rerio,carnivorous Culter alburnus and Elopichthys bambusa. We also detected the relative expression of the RNase 1 gene in different tissues in 4 fish species with different feeding habits (M. amblycephala,A. nobilis,C. alburnus and C. idella). The results showed that there was only one RNase 1 gene in the genomes of the 9 cyprinid fishes,and all the 9 identified fish RNase 1s have the signature motifs of the RNase A superfamily:N-terminal signal peptide,six conserved cysteine residues,the catalytic histidine-lysine-histidine triad and CKXXNTF motif. Phylogenetic analysis indicated that all the fish RNase 1s were clustered together. The RNase 1 genes expressed differently in different tissues of the 4 fish with different feeding habits,mainly expressed in the livers but not in the intestines.These results suggest that the evolution of RNase 1 in Cyprinidae is not related to the food habit of the species, but conforms to the evolutionary law of the species.

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刘宁,陈秀荔,黄欣.鲤科鱼类RNase1基因的进化与组织表达模式[J].华中农业大学学报,2021,40(6):126-133

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  • 收稿日期:2021-06-28
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  • 在线发布日期: 2021-11-30
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