扶桑绵粉蚧钙调蛋白基因的克隆与生物信息学分析
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农业部公益性行业科研专项(201103026)和仲恺农业工程学院科研基金项目(G3100004)


Molecular cloning and bioinformatics analysis of calmodulin genes in Phenacoccus solenopsis Tinsley
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    摘要:

    钙调蛋白(calmodulin,CaM)对生物体内多种Ca2+依赖的细胞功能和酶体系都有重要的调节作用。为研究扶桑绵粉蚧的信号转导受体蛋白,首次克隆了扶桑绵粉蚧钙调蛋白基因PsCaM的cDNA全长序列,其开放阅读框(ORF)包含447 bp的片段,编码148个氨基酸。PsCaM基因由3个内含子和4个外显子组成。3个内含子的长度分别为73、81、72 bp,分隔的4个外显子的长度分别为33、133、183、98 bp。功能域分析结果显示:该蛋白具有2个EF-hand结构域,有13个Ca2+结合位点; 该蛋白的理论等电点是6.21,属于稳定蛋白,且没有跨膜区域; 通过同源建模获得了其蛋白的三维结构。多序列比较显示,PsCaM基因相对较保守。

    Abstract:

    Calmodulin(CaM) plays an important regulatory role in a variety of in vivo Ca2+-dependent cell functions and enzyme systems. It was the first time to clone the calmodulin gene from Phenacoccus solenopsis Tinsley. The full-length of open reading frame (ORF) is 447 bp, encoding 148 amino acid residues. PsCaM gene was constituted by three introns and four exons. The intron lengths were 73,81,72 bp; The lengths of the 4 separated exons were 33,133,183,98 bp. Functional domain analysis showed that the protein got two EF-hand domains, with 13 Ca2+ binding sites. The theoretical protein isoelectric point is 6.21. It was stable protein, with no transmembrane region. The three-dimensional structure of its protein was obtained by homology modeling. Multiple sequence comparison revealed that the gene is relatively conservative. The research was the basis for further study of the functional mechanisms of calmodulin genes. 

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罗梅,董章勇,宾淑英,林进添,吴仲真,李献锋.扶桑绵粉蚧钙调蛋白基因的克隆与生物信息学分析[J].华中农业大学学报,2012,31(3):320-324

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  • 收稿日期:2011-11-12
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