致犊牛腹泻常见病毒的检测及风险因素分析
作者:
  • 何艳飞 1,2

    何艳飞

    农业微生物资源发掘与利用全国重点实验室/华中农业大学动物科学技术学院、动物医学院, 武汉 430070;生猪健康养殖协同创新中心/湖北省兽医流行病学国际科技合作基地, 武汉 430070
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 覃城皇 1,2

    覃城皇

    农业微生物资源发掘与利用全国重点实验室/华中农业大学动物科学技术学院、动物医学院, 武汉 430070;生猪健康养殖协同创新中心/湖北省兽医流行病学国际科技合作基地, 武汉 430070
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 徐肖文 1,2

    徐肖文

    农业微生物资源发掘与利用全国重点实验室/华中农业大学动物科学技术学院、动物医学院, 武汉 430070;生猪健康养殖协同创新中心/湖北省兽医流行病学国际科技合作基地, 武汉 430070
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 冼茵儿 1,2

    冼茵儿

    农业微生物资源发掘与利用全国重点实验室/华中农业大学动物科学技术学院、动物医学院, 武汉 430070;生猪健康养殖协同创新中心/湖北省兽医流行病学国际科技合作基地, 武汉 430070
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 项志杰 1,2

    项志杰

    农业微生物资源发掘与利用全国重点实验室/华中农业大学动物科学技术学院、动物医学院, 武汉 430070;生猪健康养殖协同创新中心/湖北省兽医流行病学国际科技合作基地, 武汉 430070
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 陈颖钰 1,2,3

    陈颖钰

    农业微生物资源发掘与利用全国重点实验室/华中农业大学动物科学技术学院、动物医学院, 武汉 430070;生猪健康养殖协同创新中心/湖北省兽医流行病学国际科技合作基地, 武汉 430070;湖北洪山实验室, 武汉 430070
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 郭爱珍 1,2,3

    郭爱珍

    农业微生物资源发掘与利用全国重点实验室/华中农业大学动物科学技术学院、动物医学院, 武汉 430070;生猪健康养殖协同创新中心/湖北省兽医流行病学国际科技合作基地, 武汉 430070;湖北洪山实验室, 武汉 430070
    在期刊界中查找
    在百度中查找
    在本站中查找
作者单位:

1.农业微生物资源发掘与利用全国重点实验室/华中农业大学动物科学技术学院、动物医学院, 武汉 430070;2.生猪健康养殖协同创新中心/湖北省兽医流行病学国际科技合作基地, 武汉 430070;3.湖北洪山实验室, 武汉 430070

作者简介:

何艳飞,E-mail:heyanfei@webmail.hzau.edu.cn

通讯作者:

郭爱珍,E-mail:aizhen@mail.hzau.edu.cn

中图分类号:

S858.23

基金项目:

宁夏回族自治区重点研发计划项目(2021BEF02028);国家现代农业产业技术体系专项(CARS-37)


Detection of common viruses causing calf diarrhea and analysis of risk factors
Author:
  • HE Yanfei 1,2

    HE Yanfei

    National Key Laboratory of Agricultural Microbiology/College of Veterinary Medicine,College of Animal Sciences and Technology,Huazhong Agricultural University,Wuhan 430070,China;The Cooperative Innovation Center for Sustainable Pig Production/Hubei International Science and Technology Cooperation Base of Veterinary Epidemiology,Wuhan 430070,China
    在期刊界中查找
    在百度中查找
    在本站中查找
  • QIN Chenghuang 1,2

    QIN Chenghuang

    National Key Laboratory of Agricultural Microbiology/College of Veterinary Medicine,College of Animal Sciences and Technology,Huazhong Agricultural University,Wuhan 430070,China;The Cooperative Innovation Center for Sustainable Pig Production/Hubei International Science and Technology Cooperation Base of Veterinary Epidemiology,Wuhan 430070,China
    在期刊界中查找
    在百度中查找
    在本站中查找
  • XU Xiaowen 1,2

    XU Xiaowen

    National Key Laboratory of Agricultural Microbiology/College of Veterinary Medicine,College of Animal Sciences and Technology,Huazhong Agricultural University,Wuhan 430070,China;The Cooperative Innovation Center for Sustainable Pig Production/Hubei International Science and Technology Cooperation Base of Veterinary Epidemiology,Wuhan 430070,China
    在期刊界中查找
    在百度中查找
    在本站中查找
  • XIAN Yiner 1,2

    XIAN Yiner

    National Key Laboratory of Agricultural Microbiology/College of Veterinary Medicine,College of Animal Sciences and Technology,Huazhong Agricultural University,Wuhan 430070,China;The Cooperative Innovation Center for Sustainable Pig Production/Hubei International Science and Technology Cooperation Base of Veterinary Epidemiology,Wuhan 430070,China
    在期刊界中查找
    在百度中查找
    在本站中查找
  • XIANG Zhijie 1,2

    XIANG Zhijie

    National Key Laboratory of Agricultural Microbiology/College of Veterinary Medicine,College of Animal Sciences and Technology,Huazhong Agricultural University,Wuhan 430070,China;The Cooperative Innovation Center for Sustainable Pig Production/Hubei International Science and Technology Cooperation Base of Veterinary Epidemiology,Wuhan 430070,China
    在期刊界中查找
    在百度中查找
    在本站中查找
  • CHEN Yingyu 1,2,3

    CHEN Yingyu

    National Key Laboratory of Agricultural Microbiology/College of Veterinary Medicine,College of Animal Sciences and Technology,Huazhong Agricultural University,Wuhan 430070,China;The Cooperative Innovation Center for Sustainable Pig Production/Hubei International Science and Technology Cooperation Base of Veterinary Epidemiology,Wuhan 430070,China;Hubei Hongshan Laboratory,Wuhan 430070,China
    在期刊界中查找
    在百度中查找
    在本站中查找
  • GUO Aizhen 1,2,3

    GUO Aizhen

    National Key Laboratory of Agricultural Microbiology/College of Veterinary Medicine,College of Animal Sciences and Technology,Huazhong Agricultural University,Wuhan 430070,China;The Cooperative Innovation Center for Sustainable Pig Production/Hubei International Science and Technology Cooperation Base of Veterinary Epidemiology,Wuhan 430070,China;Hubei Hongshan Laboratory,Wuhan 430070,China
    在期刊界中查找
    在百度中查找
    在本站中查找
Affiliation:

1.National Key Laboratory of Agricultural Microbiology/College of Veterinary Medicine,College of Animal Sciences and Technology,Huazhong Agricultural University,Wuhan 430070,China;2.The Cooperative Innovation Center for Sustainable Pig Production/Hubei International Science and Technology Cooperation Base of Veterinary Epidemiology,Wuhan 430070,China;3.Hubei Hongshan Laboratory,Wuhan 430070,China

  • 摘要
  • |
  • 图/表
  • |
  • 访问统计
  • |
  • 参考文献 [24]
  • | | | |
  • 文章评论
    摘要:

    为了解犊牛腹泻主要病毒的流行现状和优势毒株,2021年11月至2023年10月间,运用RT-PCR技术对来自湖北、湖南、河南、广西、贵州、甘肃、山东和内蒙古等地41个牧场的264头腹泻犊牛的264份样品(58份肛拭子、15份肠组织和191份粪便)进行了牛轮状病毒(bovine rotavirus,BRV)、牛冠状病毒(bovine coronavirus,BCoV)、牛病毒性腹泻病毒(bovine viral diarrhea virus,BVDV)的检测,进一步对以上3种病毒在不同地区、年龄、季节和品种的分布进行了分析。结果显示,BRV、BCoV和BVDV的个体阳性检出率分别为14.02%(95% CI:8.44~16.68)、10.23%(95% CI:6.85~14.53)和12.12%(95% CI:10.06~18.80),78.05%(95% CI:62.39~89.44)的牧场为犊牛腹泻病毒阳性场,29.27%(95% CI:16.13~45.54)的牧场存在有混合感染,BRV与BCoV是最为常见的混合感染组合,检出率为3.42%(95% CI:1.32~5.88)。BRV在我国北方地区、冬季和≤5周龄的犊牛中检出率较高,BCoV在我国北方地区和夏冬季节检出率高,而BVDV在各地区、年龄、品种等方面,检出率无显著差异。结果表明3种病毒在我国11个省份地区的41个牧场的腹泻犊牛中普遍存在,BRV和BCoV是导致犊牛腹泻的主要病毒,并且其流行情况受到地区、季节和年龄的影响,这提示在防控措施中应该考虑这些因素。

    Abstract:

    To understand the current epidemiological status and dominant strains of calf diarrhea viruses is important for disease prevention and control.264 diarrheic calves samples (including 58 anal swabs,15 intestinal tissues,and 191 feces) from 41 farms in Hubei,Hunan,Henan,Guangxi,Guizhou,Gansu,Shandong,and Inner Mongolia were collected between November 2021 and October 2023.RT-PCR was used for the detection of bovine rotavirus (BRV),bovine coronavirus (BCoV) and bovine viral diarrhea virus (BVDV).Results showed that the individual positive proportion of BRV,BCoV and BVDV were 14.02% (95% CI: 8.44-16.68),10.23% (95% CI: 6.85-14.53) and 12.12% (95% CI: 10.06-18.80),respectively.The farm positive proportion was 78.05% (95% CI: 62.39-89.44),in which 29.27% (95% CI: 16.13-45.54) had mixed infections.3.42% (95% CI:1.32-5.88) samples were co-infected with both BRV and BCoV,which was the most commonly combination.Furtherly,the distribution of the above three viruses in different regions,ages,seasons and breeds was analyzed.There was a high risk of BRV infection in the northern China,winter and in calves ≤5 weeks old,and BCoV had a high risk of infection in northern China,and both summer and winter.There was no significantly difference BVDV infection in different regions,ages and breeds.The results indicate that the three viruses are prevalent in diarrheal calves across 41 farms in 11 provinces in China,with BRV and BCoV being the main viruses causing calf diarrhea.Their prevalence is influenced by region,season,and age,suggesting that these factors should be considered in prevention and control measures.

    图1 BRV(A)、BCoV(B)和BVDV(C)的部分序列比对结果Fig.1 Partial sequence alignment results of BRV(A),BCoV(B)and BVDV(C)
    表 1 样品地区分布情况Table 1 Regional distribution of samples
    表 2 引物信息和序列Table 2 Primer information and sequences
    表 3 腹泻犊牛信息分布Table 3 Distribution of information on diarrhea calves
    表 4 BRV、BCoV和BVDV的阳性检出率Table 4 Positivity rate of BRV,BCoV and BVDV
    表 5 病毒混合感染类型和混合感染率Table 5 Types of viral co-infections and co-infection rates
    表 6 不同周龄腹泻犊牛3种病毒阳性检出率Table 6 Positivity rate of the 3 viruses in diarrhea calves at different weeks of age
    表 7 周龄与3种病毒阳性检出率卡方检验的P值和相关系数比值(OR)Table 7 The P values and correlation coefficient ratios (OR) of the chi-square test for weeks of age and positivity rate of the 3 viruses
    表 8 不同季节腹泻犊牛3种病毒的阳性检出率Table 8 Positivity rate of the 3 viruses in diarrhea calves in different seasons
    表 9 季节与3种病毒阳性检出率卡方检验的P值和相关系数比值(OR)Table 9 P values and correlation coefficient ratios of the chi-square test for season and positivity rate of the 3 viruses
    表 10 不同地区3种病毒的阳性检出率Table 10 Positivity rate of the 3 viruses in different area
    表 11 地区与3种病毒阳性检出率卡方检验的P值和相关系数比值(OR)Table 11 P values and correlation coefficient ratios of the chi-square test for area and positivity rate of the 3 viruses
    表 12 不同品种3种病毒的阳性检出率Table 12 Positivity rate of the 3 viruses in different species
    表 13 不同品种与3种病毒阳性检出率卡方检验的P值和相关系数比值(OR)Table 13 P values and correlation coefficient ratios of different species to the chi-square test for positivity rate of the 3 viruses
    表 14 二元Logistic多因素回归分析结果Table 14 Results of binary logistic multifactor regression analysis
    表 15 不同样本类型3种病毒的阳性检出率Table 15 Positivity rate of the 3 viruses in different sample types
    表 16 样本类型与3种病毒阳性检出率卡方检验的P值和相关系数比值(OR)Table 16 P value and correlation coefficient ratios of sample type to the chi-square test for positivity rate of the 3 viruses
    参考文献
    [1] WEI X, WANG W, DONG Z,et al. Detection of infectious agents causing neonatal calf diarrhea on two large dairy farms in Yangxin County,Shandong Province,China[J/OL]. Frontiers in veterinary science,2020,7:589126[2024-01-15].https:∥doi.org/10.3389/fvets.2020.589126.
    [2] DALL AGNOL A M,LORENZETTI E,LEME R A,et al. Severe outbreak of bovine neonatal diarrhea in a dairy calf rearing unit with multifactorial etiology[J]. Brazilian journal of microbiology,2021,52(4): 2547-2553.
    [3] ODAGIRI K,YOSHIZAWA N,SAKIHARA H,et al. Development of genotype-specific anti-bovine rotavirus a immunoglobulin yolk based on a current molecular epidemiological analysis of bovine rotaviruses a collected in Japan during 2017—2020[J/OL]. Viruses,2020,12(12):1386[2024-01-15].https:∥doi.org/10.3390/v12121386.
    [4] KIM U H,JUNG Y H,CHOE C,et al. Korean native calf mortality: the causes of calf death in a large breeding farm over a 10-year period[J]. Korean journal of veterinary research,2015,55(2): 75-80.
    [5] PAPP H,LáSZLó B,JAKAB F,et al. Review of group A rotavirus strains reported in swine and cattle[J]. Veterinary microbiology,2013,165(3-4): 190-199.
    [6] GENG H L,MENG X Z,YAN W L,et al. Prevalence of bovine coronavirus in cattle in China: a systematic review and Meta-analysis[J/OL]. Microbial pathogenesis,2023,176: 106009[2024-01-15].https:∥doi.org/10.1016/j.micpath.2023.106009.
    [7] SU N,WANG Q,LIU H-Y,et al. Prevalence of bovine viral diarrhea virus in cattle between 2010 and 2021: a global systematic review and Meta-analysis[J/OL]. Frontiers in veterinary science,2022,9: 1086180[2024-01-15].https:∥doi.org/10.3389/fvets.2022.1086180.
    [8] CHEN S,ZHANG W,ZHAI J,et al. Prevalence of bovine rotavirus among cattle in mainland China: a Meta-analysis[J/OL].Microbial pathogenesis,2022,170:105727[2024-01-15].https:∥doi.org/10.1016/j.micpath.2022.105727.
    [9] RAN X,CHEN X,MA L,et al. A systematic review and meta-analysis of the epidemiology of bovine viral diarrhea virus (BVDV) infection in dairy cattle in China[J]. Acta tropica,2019,190: 296-303.
    [10] 姜玲玲,牛小霞,刘强,等. 宁夏地区肉牛腹泻相关病毒感染状况的分析[J]. 畜牧兽医学报,2023,54(9): 3863–3871.JIANG L L,NIU X X,LIU Q,et al.Analysis of infection status of beef cattle diarrhea-related virus in Ningxia[J].Acta veterinaria et zootechnica sinica,2023,54(9):3863-3871(in Chinese with English abstract).
    [11] 王克伟,李玉峰,王先炜,等. 猪繁殖与呼吸综合征病毒和牛病毒性腹泻病毒双重RT-PCR检测方法的建立[J].畜牧与兽医,2011,43(1): 1-4.WANG K W,LI Y F,WANG X W,et al.Establishment of duplex RT-PCR assay for detection of bovine viral diarrhea virus and porcine reproductive and respiratory syndrome virus[J].Animal husbandry & veterinary medicine,2011,43(1):1-4 (in Chinese).
    [12] MAES R K,GROOMS D L,WISE A G,et al.Evaluation of a human group a rotavirus assay for on-site detection of bovine rotavirus[J].Journal of clinical microbiology,2003,41(1): 290-294.
    [13] SINGASA K,SONGSERM T,LERTWATCHARASARAKUL P,et al.Molecular and phylogenetic characterization of bovine coronavirus virus isolated from dairy cattle in Central Region,Thailand[J].Tropical animal health and production,2017,49(7): 1523-1529.
    [14] 朱梅红,邹循东,林泰南.大学生干眼影响因素的二元Logistic回归分析[J].华侨大学学报(自然科学版),2023,44(5): 622-627.ZHU M H,ZOU X D,LIN T N.Binary logistic regression analysis on influencing factors of dry eye of college students[J].Journal of Huaqiao University (natural science),2023,44(5):622-627 (in Chinese with English abstract).
    [15] 常丽云,刘志勇,李华伟,等.唐山地区奶犊牛主要腹泻相关病原的流行病学调查[J].中国畜牧兽医,2023,50(7): 2854-2864.CHANG L Y,LIU Z Y,LI H W,et al.Epidemiological investigation of the main diarrhea related pathogens in dairy calves in Tangshan area[J].China animal husbandry & veterinary medicine,2023,50(7):2854-2864(in Chinese with English abstract).
    [16] QIN Y F,GONG Q L,ZHANG M,et al.Prevalence of bovine rotavirus among Bovidae in China during 1984—2021: a systematic review and Meta-analysis[J/OL].Microbial pathogenesis,2022,169:105661[2024-01-15].https:∥doi.org/10.1016/j.micpath.2022.105661.
    [17] 常丽云.唐山市奶犊牛传染性腹泻病原分布特征、主要病毒检测方法与治疗研究[D].保定:河北农业大学,2021.CHANG L Y.Study on the pathogen distribution characteristics,main virus detection method and treatment of infectious diarrhea in Tangshan City[D].Baoding:Hebei Agricultural University,2021(in Chinese with English abstract).
    [18] 张亮,张云飞,蒋仁新,等.2017—2018年山东省奶牛场犊牛腹泻相关病毒病原学检测[J].中国动物检疫,2020,37(6): 16-20.ZHANG L,ZHANG Y F,JIANG R X,et al.Pathogenic detection of viruses related to calf diarrhea in dairy farms in Shandong Province during 2017 to 2018[J].China animal health inspection,2020,37(6):16-20 (in Chinese with English abstract).
    [19] UDDIN AHMED N,KHAIR A,HASSAN J,et al.Risk factors for bovine rotavirus infection and genotyping of bovine rotavirus in diarrheic calves in Bangladesh[J/OL].PLoS one,2022,17(2):e0264577[2024-01-15].https:∥doi.org/10.1371/journal.pone.0264577.
    [20] 杨德新,闫磊,朱小洁,等.河南地区4种致犊牛腹泻病原的调查与分析[J].黑龙江畜牧兽医,2022(4): 73-77.YANG D X,YAN L,ZHU X J,et al.Investigation and analysis of four pathogens causing calf diarrhea in Henan Province[J].Heilongjiang animal science and veterinary medicine,2022(4):73-77(in Chinese with English abstract).
    [21] WANG D,GAO H,ZHAO L,et al.Detection of the dominant pathogens in diarrheal calves of Ningxia,China in 2021—2022[J/OL].Frontiers in veterinary science,2023,10:1155061[2024-01-15].https:∥doi.org/10.3389/fvets.2023.1155061.
    [22] ZHU Q,QI S,GUO D,et al.A survey of fecal virome and bacterial community of the diarrhea-affected cattle in northeast China reveals novel disease-associated ecological risk factors[J/OL].mSystems,2024,9(1):e0084223[2024-01-15].https:∥doi.org/10.1128/msystems.00842-23 .
    [23] GHONAIM A H,HOPO M G,GHONAIM N H,et al.The epidemiology of circulating rotavirus associated with diarrhea in Egyptian kids and calves: a review[J/OL].Zoonoses,2023,3(1): 985[2024-01-15].https:∥doi.org/10.15212/ZOONOSES-2023-0004.
    [24] CHO Y,YOON K J.An overview of calf diarrhea-infectious etiology,diagnosis,and intervention[J].Journal of veterinary science,2014,15(1): 1-17.
    相似文献
    引证文献
    网友评论
    网友评论
    分享到微博
    发 布
引用本文

何艳飞,覃城皇,徐肖文,冼茵儿,项志杰,陈颖钰,郭爱珍.致犊牛腹泻常见病毒的检测及风险因素分析[J].华中农业大学学报,2025,44(1):174-182

复制
分享
文章指标
  • 点击次数:5
  • 下载次数: 23
  • HTML阅读次数: 1
  • 引用次数: 0
历史
  • 收稿日期:2024-01-15
  • 在线发布日期: 2025-03-03
文章二维码