利用重组自交系群体定位水稻茎粗QTL
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作者:
作者单位:

1.华中农业大学生命科学技术学院/作物遗传改良全国重点实验室,武汉430070;2.农业农村部西南水稻生物学与遗传育种重点实验室,德阳618000

作者简介:

朱小平,E-mail: zhuxiaoping@webmail.hzau.edu.cn

通讯作者:

林拥军,E-mail: yongjunlin@mail.hzau.edu.cn

中图分类号:

S511.2+1

基金项目:

国家转基因重大专项(2016ZX08001-001)


Mapping QTLs for internode diameter using a population of recombinant inbred lines
Author:
Affiliation:

1.National Key Laboratory of Crop Genetic Improvement/ College of Biology Science and Technology,Huazhong Agricultural University, Wuhan 430070,China;2.Ministry of Agriculture and Rural Affairs Key Laboratory of Southwest Rice Life and Genetic Breeding,Deyang 618000,China

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    摘要:

    为开展水稻茎粗相关基因的精细定位,利用岗46B/A232的高世代重组自交系群体和基于重测序构建的高密度遗传连锁图谱,采用复合区间作图法(CIM),利用R/qtl软件包对水稻倒二节的节间直径(RSID)和倒三节的节间直径(RTID)进行QTL分析,共检测到3个控制倒二节茎粗的QTL和7个倒三节茎粗的QTL,分布在第2、3、4、7、11号染色体上。其中2号染色体上的qRSID2-1qRTID2-1距离较近,qRSID2-2/qRTID2-2qRTID2-3可能是同一位点,并在多次试验中被重复检测到,表型贡献率为7.89%~12.36%,物理区间在100 kb之内。

    Abstract:

    The population of G46B/A232 RILs and the high-density genetic linkage map created by resequencing the population were used to map QTLs for internode diameter of reciprocal second internode and reciprocal third internode with the R/qtl software package and CIM method.A total of 3 QTLs for the diameter of reciprocal second internode and 7 QTLs for the diameter of reciprocal third inter nodes were detected,which were distributed on chromosomes 2,3,4,7,and 11.On chromosome 2,qRSID2-1 and qRTID2-1 are relatively close.qRSID2-2/qRTID2-2 and qRTID2-3 repeatedly detected in multiple trials may be the same QTL,with phenotypic contribution rates of 7.89%-12.36% and the physical interval within 100 kb on chromosome 2.The genetic study of the internode diameter of reciprocal second internode and reciprocal third internode in rice will lay a foundation for fine mapping QTLs for the internode diameter,which is beneficial to the molecular breeding and germplasm innovation of rice varieties with lodging resistance and ideal plant type.

    表 1 双亲及RIL群体的茎粗性状表型统计Table 1 Statistics of phenotypic variations for internode diameter in parents and RIL populations
    表 2 RIL群体中茎粗QTLs的定位Table 2 QTLs for internode diameter in RIL populations
    图1 亲本的茎秆特征Fig,1 Stem characteristics of two parental linesFig.1
    图2 RIL群体的倒二节茎粗(A)和倒三节茎粗(B)频数分布Fig.2 Frequent distribution of diameter of reciprocal second internode(A) and diameter of reciprocal third internode(B) in RIL populations
    图3 茎粗QTL在染色体上的物理位置示意图Fig.3 Schematic diagram of the physical location of QTL to internode diameter on chromosomes
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朱小平,李传旭,宁卫东,张建国,曾静,毛毳,李永洪,林拥军.利用重组自交系群体定位水稻茎粗QTL[J].华中农业大学学报,2022,41(4):178-183

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  • 收稿日期:2022-05-12
  • 在线发布日期: 2022-10-12
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