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Anal y zin g transcri p tomeofS p orisoriumscitamineum
strainswithdifferent p atho g enicit y
,
,
WUJia , LIHuizhon g DENG Quan q in g CHENJianwen , SHEN Wankuan
/
Colle g eo fA g ronom y Ministr yo fA g ricultureandRuralA ff airs , Scienti f ic
Observin gandEx p erimentalStationo fCro pCultivationinSouthChina ,
SouthChinaA g riculturalUniversit y Guan g zhou510642 , China
,
Abstract Illuminase q uencin g technolo gywasusedtoconstructthecDNAlibrar y oftwoS p orisoriG
),
)
umscitamineum strainsSs16 ( stron gp atho g enicit y andSs47 ( weakp atho g enicit y followedb ytranG
,
scri p tomese q uencin gandbioinformaticsanal y sisafter q ualit ycontrolinordertoinvesti g atethedifferG
encesattranscri p tionallevelbetweenS.scitamineum strainswithdifferentp atho g enicit yanddiscover
p atho g enicit y Grelatedg enes.Theresultsshowedthatatotalof8.31G ( Ss16 ) and9.88G ( Ss47 ) cleanreads
wereobtained.Therewere649differentiall yex p ressedg enes ( DEGs ) includin g299u p Gre g ulatedg enes
and350downGre g ulated g enesbetweenSs16andSs47.ResultsofGOannotationandKEGGp athwa y enG
richmentanal y sesshowedthatDEGsweresi g nificantl yenrichedinKEGGp athwa y sinvolvedinstarch
andsucrosemetabolism , ABCtrans p orters , de g radationofaromaticcom p ounds , metabolic p athwa y s , uG
p
rinemetabolism.These p athwa y saremostl y relatedto p roteinbios y nthesis , trans p ortandmetabolismof
substances.Itwill p rovidemolecularbasisforrevealin g thep atho g enicmechanismofS.scitamineum.
Ke y words su g arcane ; S p orisoriumscitamineum ; transcri p tome ; atho g enicit y Grelatedg enes ; difG
p
ferentiall yex p ressedg enes ( DEGs ); bioinformaticsanal y sis
( 责任编辑: 张志钰)